DNA Tools : few utils for people working with DNA sequences
| script karma |
Rating 10/4,
Downloaded by 569 |
Comments, bugs, improvements
|
Vim wiki
|
| created by |
| Alexandru Constantinescu |
| |
| script type |
| utility |
| |
| description |
My $0.02 worth of...
Working with DNA sequences, especially if you don't have a Unix machine handy might need a few tools. Some of the modifications are simple enough that even a trivial Vim script would deal with.
What you can do:
- get the reverse-complement of a sequence
- count A/T/C/Gs in a sequence and get a very crude Tm for a primer
- brush-up a few file formats (PS from ClustalX, FASTA etc).
Many thanks to Will Nater and Tim Chase for helping!
Version "1.0" means that, up to now, I did not have any screwed-up sequence, but this is far from saying that it's definitely foolproof. |
| |
| install details |
| Just drop it in your plugins directory. It will also install a menu entry for each function (Tools/Cleanup and Tools/DNA) |
| |
script versions (upload new version)
Click on the package to download.
ip used for rating: 18.224.95.38
|
